STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3CQP0_TETNGNeuronal PAS domain protein 1. (474 aa)    
Predicted Functional Partners:
H3DCQ5_TETNG
UBX domain-containing protein 7.
    
 0.838
H3CFF9_TETNG
BHLH domain-containing protein.
    
 0.693
H3CKD8_TETNG
Uncharacterized protein.
    
 0.693
H3CRK4_TETNG
Aryl hydrocarbon receptor nuclear translocator.
    
0.693
Q4RG26_TETNG
Chromosome 2 SCAF15106, whole genome shotgun sequence.
    
 0.619
H3CTJ0_TETNG
Cullin 2; Belongs to the cullin family.
    
 0.609
H3CAY9_TETNG
Egl-9 family hypoxia-inducible factor 3.
    
 0.587
H3CK77_TETNG
Fe2OG dioxygenase domain-containing protein.
    
 0.587
H3CQP2_TETNG
Egl-9 family hypoxia-inducible factor 2.
    
 0.587
H3DGX5_TETNG
Egl-9 family hypoxia-inducible factor 1a.
    
 0.587
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.