STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3CR28_TETNGUncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2097 aa)    
Predicted Functional Partners:
H3CGC5_TETNG
Whirlin a.
    
 0.520
H3CME4_TETNG
Usher syndrome 1C.
   
 0.512
H3CWN5_TETNG
Usher syndrome 1Ga (autosomal recessive).
   
 0.430
H3D2T6_TETNG
Usher syndrome 1Gb (autosomal recessive).
   
 0.430
H3DKU7_TETNG
Ankyrin repeat and sterile alpha motif domain containing 4B.
   
 0.430
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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