STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GORASP2Golgi reassembly stacking protein 2. (428 aa)    
Predicted Functional Partners:
H3CVM9_TETNG
Basic leucine zipper nuclear factor 1.
   
 0.871
H3CUD4_TETNG
Golgin A2.
    
 0.802
H3D0E2_TETNG
USO1 vesicle transport factor.
   
 0.794
H3CCZ0_TETNG
Peptidylprolyl isomerase.
    
 0.705
H3CA68_TETNG
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.677
H3D3F0_TETNG
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.677
H3DHC6_TETNG
Syntaxin 5A; Belongs to the syntaxin family.
    
 0.675
H3CCT6_TETNG
RAB2A, member RAS oncogene family.
   
 0.654
H3DK72_TETNG
Bet1 golgi vesicular membrane trafficking protein.
    
 0.643
H3CBZ9_TETNG
Uncharacterized protein.
   
 0.631
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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