STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3CRG6_TETNGPeroxisomal biogenesis factor 5. (645 aa)    
Predicted Functional Partners:
H3CNC1_TETNG
Sterol carrier protein 2a; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.996
H3C6B1_TETNG
Hydroxysteroid dehydrogenase like 2.
   
 0.964
H3CF10_TETNG
NBR1 autophagy cargo receptor b.
    
 0.958
H3DA87_TETNG
NBR1 autophagy cargo receptor a.
    
 0.958
H3DCI8_TETNG
Peroxisomal biogenesis factor 14.
   
 0.957
H3D7Q2_TETNG
Enoyl-CoA delta isomerase 2.
   
 0.946
H3DI99_TETNG
SH3 domain-containing protein.
   
 0.940
H3D920_TETNG
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
   
 0.934
H3CY23_TETNG
AB hydrolase-1 domain-containing protein.
   
 0.927
H3CTD9_TETNG
Zinc finger, AN1-type domain 4.
    
 0.924
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.