STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3CSU7_TETNGATP-binding cassette, sub-family B (MDR/TAP), member 8. (656 aa)    
Predicted Functional Partners:
H3CU75_TETNG
ATP-binding cassette, sub-family B (MDR/TAP), member 7.
    
0.683
H3CBP7_TETNG
Thymine DNA glycosylase, tandem duplicate 2.
      
 0.539
H3C9D1_TETNG
Uncharacterized protein.
   
 0.526
STEAP3
Chromosome 3 SCAF15117, whole genome shotgun sequence.
      
 0.499
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
  
 0.491
H3DH67_TETNG
ATPase family AAA domain containing 1a; Belongs to the AAA ATPase family.
  
 0.484
CDH12
Cadherin 12; Cadherins are calcium-dependent cell adhesion proteins.
      
 0.422
H3C8A5_TETNG
Coiled-coil domain containing 51.
    
 
 0.411
H3CP78_TETNG
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
   
  
 0.411
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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