STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3CSX0_TETNGRRM domain-containing protein. (444 aa)    
Predicted Functional Partners:
H3D9U7_TETNG
PNN-interacting serine/arginine-rich protein.
   
 
 0.783
H3C6P7_TETNG
Serine and arginine rich splicing factor 2a.
   
 0.758
H3DHN3_TETNG
Serine/arginine repetitive matrix 1.
   
 0.742
H3D9V2_TETNG
Serine and arginine rich splicing factor 7a.
   
 0.715
H3BZ85_TETNG
Serine and arginine rich splicing factor 9.
   
 0.690
H3C295_TETNG
RRM domain-containing protein.
   
 0.677
SRSF3
Serine and arginine rich splicing factor 3.
   
 0.677
H3CH30_TETNG
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.669
H3DHJ7_TETNG
Pinin, desmosome associated protein.
   
 
 0.654
H3CIH4_TETNG
Poly(A) binding protein, nuclear 1.
   
 0.634
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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