STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3CTE0_TETNGCAP-ZIP_m domain-containing protein. (1341 aa)    
Predicted Functional Partners:
H3DPG8_TETNG
WAS protein family homolog 1.
    
 
 0.904
H3D1H5_TETNG
WASH complex subunit 3.
    
 
 0.821
H3CSF2_TETNG
WASH complex subunit 4.
   
 
 0.812
H3DP53_TETNG
WASH complex subunit 5.
   
 
 0.772
Q4RAG4_TETNG
Chromosome undetermined SCAF23687, whole genome shotgun sequence.
   
 
 0.772
H3CHD5_TETNG
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
    
 
 0.727
H3D4C5_TETNG
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
    
 
 0.693
H3CK78_TETNG
Uncharacterized protein.
    
 
 0.600
H3CLA9_TETNG
ARID domain-containing protein.
   
  
 0.570
H3C661_TETNG
TBC1 domain family, member 5.
   
 
 0.543
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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