STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLIP4CAP-Gly domain containing linker protein family member 4. (697 aa)    
Predicted Functional Partners:
H3CD32_TETNG
CAP-Gly domain-containing protein.
    
  0.514
H3CF61_TETNG
USP domain-containing protein.
    
  0.514
H3CFC8_TETNG
USP domain-containing protein.
    
  0.514
H3CPD3_TETNG
Uncharacterized protein.
    
  0.514
H3D2V8_TETNG
Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I.
      
 0.509
H3CDG1_TETNG
Uncharacterized protein.
    
  0.497
H3CE94_TETNG
Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.
    
  0.496
H3CRH8_TETNG
Tumor necrosis factor receptor superfamily, member 1a.
    
  0.496
H3DEC4_TETNG
X-linked inhibitor of apoptosis.
   
  0.477
H3DQ17_TETNG
BUB3 mitotic checkpoint protein.
    
 0.436
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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