H3CUA4_TETNG protein (Tetraodon nigroviridis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

H3CUA4_TETNG

Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (362 aa)

Predicted Functional Partners:

H3DI94_TETNG

0.614

MAPKAPK2

0.603

H3BX65_TETNG

0.489

H3DG10_TETNG

0.476

H3CCC1_TETNG

0.457

H3CHD0_TETNG

0.457

H3CYS9_TETNG

0.457

H3DGI3_TETNG

0.457

H3CA03_TETNG

0.434

H3D9D6_TETNG

0.427

Your Current Organism:

Tetraodon nigroviridis

NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3BX65_TETNG	H3CA03_TETNG	ENSTNIP00000000578	ENSTNIP00000005075	Fos-like antigen 2.	Activating transcription factor 3.	0.479
H3BX65_TETNG	H3CCC1_TETNG	ENSTNIP00000000578	ENSTNIP00000005893	Fos-like antigen 2.	Mitogen-activated protein kinase.	0.570
H3BX65_TETNG	H3CHD0_TETNG	ENSTNIP00000000578	ENSTNIP00000007658	Fos-like antigen 2.	Mitogen-activated protein kinase.	0.570
H3BX65_TETNG	H3CUA4_TETNG	ENSTNIP00000000578	ENSTNIP00000011838	Fos-like antigen 2.	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	0.489
H3BX65_TETNG	H3CYS9_TETNG	ENSTNIP00000000578	ENSTNIP00000013414	Fos-like antigen 2.	Mitogen-activated protein kinase.	0.570
H3BX65_TETNG	H3DG10_TETNG	ENSTNIP00000000578	ENSTNIP00000019454	Fos-like antigen 2.	V-fos FBJ murine osteosarcoma viral oncogene homolog Ab.	0.621
H3BX65_TETNG	H3DGI3_TETNG	ENSTNIP00000000578	ENSTNIP00000019627	Fos-like antigen 2.	Mitogen-activated protein kinase.	0.570
H3CA03_TETNG	H3BX65_TETNG	ENSTNIP00000005075	ENSTNIP00000000578	Activating transcription factor 3.	Fos-like antigen 2.	0.479
H3CA03_TETNG	H3CCC1_TETNG	ENSTNIP00000005075	ENSTNIP00000005893	Activating transcription factor 3.	Mitogen-activated protein kinase.	0.522
H3CA03_TETNG	H3CHD0_TETNG	ENSTNIP00000005075	ENSTNIP00000007658	Activating transcription factor 3.	Mitogen-activated protein kinase.	0.522
H3CA03_TETNG	H3CUA4_TETNG	ENSTNIP00000005075	ENSTNIP00000011838	Activating transcription factor 3.	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	0.434
H3CA03_TETNG	H3CYS9_TETNG	ENSTNIP00000005075	ENSTNIP00000013414	Activating transcription factor 3.	Mitogen-activated protein kinase.	0.516
H3CA03_TETNG	H3DG10_TETNG	ENSTNIP00000005075	ENSTNIP00000019454	Activating transcription factor 3.	V-fos FBJ murine osteosarcoma viral oncogene homolog Ab.	0.801
H3CA03_TETNG	H3DGI3_TETNG	ENSTNIP00000005075	ENSTNIP00000019627	Activating transcription factor 3.	Mitogen-activated protein kinase.	0.522
H3CCC1_TETNG	H3BX65_TETNG	ENSTNIP00000005893	ENSTNIP00000000578	Mitogen-activated protein kinase.	Fos-like antigen 2.	0.570
H3CCC1_TETNG	H3CA03_TETNG	ENSTNIP00000005893	ENSTNIP00000005075	Mitogen-activated protein kinase.	Activating transcription factor 3.	0.522
H3CCC1_TETNG	H3CUA4_TETNG	ENSTNIP00000005893	ENSTNIP00000011838	Mitogen-activated protein kinase.	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	0.457
H3CCC1_TETNG	H3CYS9_TETNG	ENSTNIP00000005893	ENSTNIP00000013414	Mitogen-activated protein kinase.	Mitogen-activated protein kinase.	0.924
H3CCC1_TETNG	H3D9D6_TETNG	ENSTNIP00000005893	ENSTNIP00000017127	Mitogen-activated protein kinase.	Mitogen-activated protein kinase kinase 7.	0.868
H3CCC1_TETNG	H3DG10_TETNG	ENSTNIP00000005893	ENSTNIP00000019454	Mitogen-activated protein kinase.	V-fos FBJ murine osteosarcoma viral oncogene homolog Ab.	0.683