STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIX1LLimb and CNS expressed 1 like. (338 aa)    
Predicted Functional Partners:
Q4SVE4_TETNG
Chromosome 21 SCAF13761, whole genome shotgun sequence.
   
    0.815
H3D9G2_TETNG
CWC25 spliceosome associated protein homolog.
   
    0.815
MOCS3
Adenylyltransferase and sulfurtransferase MOCS3; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Also essential during biosynthesis of the molybdenum cofactor. Acts by mediating the C-terminal thiocarboxylation of sulfur carriers URM1 and MOCS2A. Its N-terminus first activates URM1 and MOCS2A as acyl- adenylates (-COAMP), then the persulfide sulfur on the catalytic cysteine is transferred to URM1 and MOCS2A to form thiocarboxylation (- COSH) of their C-terminus. The reaction probably involves hydrogen sulfide [...]
   
    0.686
H3CZC8_TETNG
Acyl-CoA thioesterase 11b.
   
    0.675
H3DMX6_TETNG
Uncharacterized protein.
   
    0.675
H3DII3_TETNG
Src homology 2 domain containing transforming protein D, a.
   
    0.639
H3C8V4_TETNG
LAM_G_DOMAIN domain-containing protein.
   
 0.628
H3CJ62_TETNG
FAT atypical cadherin 3a.
   
 0.628
H3CX61_TETNG
FAT atypical cadherin 3b.
   
 0.628
H3DAK7_TETNG
ALG11 alpha-1,2-mannosyltransferase.
   
    0.615
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.