STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTDSPL2CTD small phosphatase like 2. (469 aa)    
Predicted Functional Partners:
H3D509_TETNG
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
   
 0.764
H3CT68_TETNG
Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.
    
 0.619
H3D0V9_TETNG
Polymerase (RNA) II (DNA directed) polypeptide D.
    
 0.606
TIMM21
Translocase of inner mitochondrial membrane 21.
    
 0.603
H3D0S7_TETNG
Transcription elongation factor SPT5.
    
 0.573
Q4TAB3_TETNG
Chromosome undetermined SCAF7390, whole genome shotgun sequence.
    
 0.557
Q4SXE9_TETNG
Chromosome undetermined SCAF12429, whole genome shotgun sequence.
    
 0.538
Q4SK90_TETNG
Chromosome 13 SCAF14566, whole genome shotgun sequence.
    
 0.538
H3DQ59_TETNG
Polymerase (RNA) II (DNA directed) polypeptide G-like.
    
 0.538
Q4RCT8_TETNG
Chromosome undetermined SCAF18092, whole genome shotgun sequence.
    
 0.538
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.