STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3CVQ6_TETNGRNA binding motif protein 26. (961 aa)    
Predicted Functional Partners:
H3DQY7_TETNG
zf-C3H1 domain-containing protein.
   
 
 0.673
H3CIH4_TETNG
Poly(A) binding protein, nuclear 1.
    
 
 0.518
PABPN1L
Poly(A) binding protein nuclear 1 like, cytoplasmic.
    
 
 0.518
H3CPN4_TETNG
RRM domain-containing protein.
    
 
 0.424
H3CWK6_TETNG
RNA binding protein S1, serine-rich domain.
    
 
 0.424
H3C385_TETNG
Mtr4 exosome RNA helicase.
   
 
 0.422
H3CQ22_TETNG
Mtr4 exosome RNA helicase.
   
 
 0.422
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.