STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3CWE5_TETNGSerine palmitoyltransferase, long chain base subunit 2b. (511 aa)    
Predicted Functional Partners:
Q4SYL4_TETNG
Chromosome 10 SCAF12030, whole genome shotgun sequence.
  
  
 
0.901
H3CL90_TETNG
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 
 0.833
H3CNM2_TETNG
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 
 0.833
SHMT2
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 
 0.833
Q4T978_TETNG
Chromosome undetermined SCAF7631, whole genome shotgun sequence.
    
 0.825
H3DCS6_TETNG
Serine--pyruvate aminotransferase.
    
 0.825
SDS
Serine dehydratase.
   
 0.824
Q4RN61_TETNG
Chromosome undetermined SCAF15016, whole genome shotgun sequence.
   
 0.824
H3CK68_TETNG
Uncharacterized protein.
 
 
 0.823
H3CH35_TETNG
Aminotran_1_2 domain-containing protein.
   
 0.777
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.