STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3CXF7_TETNGMethylphosphate capping enzyme. (509 aa)    
Predicted Functional Partners:
H3CP02_TETNG
La ribonucleoprotein domain family, member 7.
    
 
 0.982
H3CYD5_TETNG
Cyclin T2b; Belongs to the cyclin family.
    
 
 0.698
H3C9M3_TETNG
Protein kinase domain-containing protein.
    
 
 0.692
Q4RH34_TETNG
Chromosome undetermined SCAF15070, whole genome shotgun sequence; Belongs to the protein kinase superfamily.
    
 
 0.692
H3CQ39_TETNG
Cyclin T2; Belongs to the cyclin family.
    
 
 0.688
H3BVX4_TETNG
HEXIM P-TEFb complex subunit 1.
    
 
 0.675
H3DEK9_TETNG
Spliceosome associated factor 3, U4/U6 recycling protein.
    
 
 0.673
H3CRJ8_TETNG
PRP3 pre-mRNA processing factor 3 homolog (yeast).
    
 
 0.555
H3CEP6_TETNG
FIP1 like 1b (S. cerevisiae).
    
 
 0.515
H3DKT1_TETNG
U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase; RNA N6-methyltransferase that methylates adenosine residues of a subset of RNAs and plays a key role in S-adenosyl-L-methionine homeostasis by regulating expression of MAT2A transcripts. Able to N6- methylate a subset of mRNAs and U6 small nuclear RNAs (U6 snRNAs). In contrast to the METTL3-METTL14 heterodimer, only able to methylate a limited number of RNAs: requires both a 5'UACAGAGAA-3' nonamer sequence and a specific RNA structure. In presence of S-adenosyl-L-methionine, binds the 3'-UTR region of MAT2A mRNA and specifical [...]
    
 
 0.513
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.