STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3CXR6_TETNGArfGAP with coiled-coil, ankyrin repeat and PH domains 1. (777 aa)    
Predicted Functional Partners:
Q4SF74_TETNG
Chromosome undetermined SCAF14608, whole genome shotgun sequence.
      
 0.647
EIF5AL1
Eukaryotic translation initiation factor 5A.
      
 0.597
YBX2
Y-box binding protein 2.
      
 0.592
H3CBZ3_TETNG
Leucine-rich repeats and calponin homology (CH) domain containing 4.
   
  
 0.549
H3D153_TETNG
Si:dkey-16l2.16.
    
 
 0.534
H3D1L6_TETNG
RAB35, member RAS oncogene family b.
    
 
 0.534
H3CMY2_TETNG
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.
    
 
0.517
H3DEW9_TETNG
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.
    
 
0.517
H3DLR9_TETNG
Uncharacterized protein.
    
 
0.517
H3D2U0_TETNG
Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
     
 0.422
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.