Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DENND1B | H3CK79_TETNG | ENSTNIP00000013075 | ENSTNIP00000008658 | DENN domain containing 1B. | DENN/MADD domain containing 1A. | 0.484 |
DENND1B | H3CQ88_TETNG | ENSTNIP00000013075 | ENSTNIP00000010422 | DENN domain containing 1B. | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | 0.484 |
DENND1B | H3D153_TETNG | ENSTNIP00000013075 | ENSTNIP00000014239 | DENN domain containing 1B. | Si:dkey-16l2.16. | 0.769 |
DENND1B | H3D1L6_TETNG | ENSTNIP00000013075 | ENSTNIP00000014404 | DENN domain containing 1B. | RAB35, member RAS oncogene family b. | 0.769 |
DENND1B | H3DLL3_TETNG | ENSTNIP00000013075 | ENSTNIP00000021411 | DENN domain containing 1B. | Sulfite oxidase. | 0.562 |
DENND1B | Q4RQW6_TETNG | ENSTNIP00000013075 | ENSTNIP00000019511 | DENN domain containing 1B. | Chromosome 14 SCAF15003, whole genome shotgun sequence. | 0.414 |
DENND1B | Q4SF32_TETNG | ENSTNIP00000013075 | ENSTNIP00000013074 | DENN domain containing 1B. | Chromosome 1 SCAF14609, whole genome shotgun sequence. | 0.679 |
DENND1B | RAB28 | ENSTNIP00000013075 | ENSTNIP00000018808 | DENN domain containing 1B. | RAB28, member RAS oncogene family. | 0.400 |
H3C6X7_TETNG | H3CK79_TETNG | ENSTNIP00000003998 | ENSTNIP00000008658 | Si:dkey-76b14.2. | DENN/MADD domain containing 1A. | 0.493 |
H3C6X7_TETNG | H3CQ88_TETNG | ENSTNIP00000003998 | ENSTNIP00000010422 | Si:dkey-76b14.2. | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | 0.484 |
H3C6X7_TETNG | H3D153_TETNG | ENSTNIP00000003998 | ENSTNIP00000014239 | Si:dkey-76b14.2. | Si:dkey-16l2.16. | 0.769 |
H3C6X7_TETNG | H3D1L6_TETNG | ENSTNIP00000003998 | ENSTNIP00000014404 | Si:dkey-76b14.2. | RAB35, member RAS oncogene family b. | 0.769 |
H3C6X7_TETNG | H3DLL3_TETNG | ENSTNIP00000003998 | ENSTNIP00000021411 | Si:dkey-76b14.2. | Sulfite oxidase. | 0.562 |
H3C6X7_TETNG | Q4SF32_TETNG | ENSTNIP00000003998 | ENSTNIP00000013074 | Si:dkey-76b14.2. | Chromosome 1 SCAF14609, whole genome shotgun sequence. | 0.602 |
H3C6X7_TETNG | RAB28 | ENSTNIP00000003998 | ENSTNIP00000018808 | Si:dkey-76b14.2. | RAB28, member RAS oncogene family. | 0.400 |
H3CK79_TETNG | DENND1B | ENSTNIP00000008658 | ENSTNIP00000013075 | DENN/MADD domain containing 1A. | DENN domain containing 1B. | 0.484 |
H3CK79_TETNG | H3C6X7_TETNG | ENSTNIP00000008658 | ENSTNIP00000003998 | DENN/MADD domain containing 1A. | Si:dkey-76b14.2. | 0.493 |
H3CK79_TETNG | H3CQ88_TETNG | ENSTNIP00000008658 | ENSTNIP00000010422 | DENN/MADD domain containing 1A. | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | 0.519 |
H3CK79_TETNG | H3D153_TETNG | ENSTNIP00000008658 | ENSTNIP00000014239 | DENN/MADD domain containing 1A. | Si:dkey-16l2.16. | 0.829 |
H3CK79_TETNG | H3D1L6_TETNG | ENSTNIP00000008658 | ENSTNIP00000014404 | DENN/MADD domain containing 1A. | RAB35, member RAS oncogene family b. | 0.882 |
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