STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3CXX1_TETNGRogdi atypical leucine zipper. (287 aa)    
Predicted Functional Partners:
H3CVW1_TETNG
Dmx-like 2.
    
 
 0.928
DMXL1
Dmx like 1.
    
 
 0.928
Q4T9N8_TETNG
Chromosome undetermined SCAF7519, whole genome shotgun sequence; Belongs to the SKP1 family.
    
 
 0.799
H3CTR1_TETNG
ATPase H+ transporting V1 subunit E1a.
    
 
 0.648
Q4SAA3_TETNG
Chromosome 19 SCAF14691, whole genome shotgun sequence.
    
 
 0.648
H3DFG5_TETNG
SET and MYND domain containing 4.
      
 0.581
H3C835_TETNG
ATP-synt_ab domain-containing protein.
   
 
 0.576
H3C8H2_TETNG
ATP-synt_ab domain-containing protein.
   
 
 0.576
H3CJW0_TETNG
Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.
   
 
 0.576
H3D7W5_TETNG
Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.
   
 
 0.576
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.