STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3CYP2_TETNGUncharacterized protein. (362 aa)    
Predicted Functional Partners:
H3DQU9_TETNG
Uncharacterized protein.
 
      0.722
H3CPF5_TETNG
Macrophage stimulating 1 receptor b.
    
 0.670
H3DB91_TETNG
Macrophage stimulating 1 receptor a.
    
 0.670
H3DF54_TETNG
MET proto-oncogene, receptor tyrosine kinase.
    
 0.670
H3DPG9_TETNG
Uncharacterized protein.
 
  
  0.550
Q4RMB7_TETNG
Chromosome 10 SCAF15019, whole genome shotgun sequence; Belongs to the universal ribosomal protein uL13 family.
   
  0.487
H3DCV0_TETNG
PAS domain containing serine/threonine kinase.
    
 0.408
H3BZA2_TETNG
Platelet-derived growth factor receptor alpha; Tyrosine-protein kinase that acts as a cell-surface receptor for PDGFA, PDGFB and PDGFC and plays an essential role in the regulation of embryonic development, cell proliferation, survival and chemotaxis. Depending on the context, promotes or inhibits cell proliferation and cell migration. Plays an important role in the differentiation of bone marrow-derived mesenchymal stem cells. Required for normal skeleton development.
   
 0.403
H3D592_TETNG
Fms-related tyrosine kinase 3; Belongs to the protein kinase superfamily. Tyr protein kinase family.
   
 0.403
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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