STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3CYQ0_TETNGRNA helicase. (815 aa)    
Predicted Functional Partners:
H3CAM7_TETNG
Uncharacterized protein.
   
 
 0.997
UTP14C
UTP14C small subunit processome component.
   
 0.997
H3DKE7_TETNG
RNA helicase.
  
  
0.993
H3C499_TETNG
Nucleolar protein with MIF4G domain 1.
   
 
 0.987
H3DBC9_TETNG
UTP3 small subunit processome component.
   
 0.985
H3CDV3_TETNG
Nucleolar protein 6.
   
 0.980
H3DBW7_TETNG
Activator of basal transcription 1.
   
 
 0.980
H3BX33_TETNG
Ribosomal RNA processing 36.
   
 0.978
H3DAY4_TETNG
Bystin-like.
   
 
 0.975
H3D3G1_TETNG
Programmed cell death 11.
  
 0.974
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.