STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3CYU0_TETNGSpondin 2a, extracellular matrix protein. (332 aa)    
Predicted Functional Partners:
H3DR02_TETNG
Integrin alpha FG-GAP repeat containing 2.
      
 0.545
H3DG95_TETNG
Protein O-fucosyltransferase 2.
     
 0.544
H3CX19_TETNG
Beta 3-glucosyltransferase b.
     
 0.413
Q4RRH7_TETNG
Chromosome 16 SCAF15002, whole genome shotgun sequence.
     
 0.413
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.