STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3CZ30_TETNGRAD17 checkpoint clamp loader component. (623 aa)    
Predicted Functional Partners:
Q4SG11_TETNG
Chromosome 7 SCAF14601, whole genome shotgun sequence.
   
 0.998
Q4SDY0_TETNG
Chromosome undetermined SCAF14628, whole genome shotgun sequence.
   
 0.998
H3DBW1_TETNG
Replication factor C (activator 1) 2.
    
 0.998
H3DDU4_TETNG
Replication factor C (activator 1) 5.
   
 0.998
H3BWC7_TETNG
RAD1 homolog (S. pombe).
   
 0.995
HUS1B
Checkpoint protein; Belongs to the HUS1 family.
   
 0.995
H3D1K8_TETNG
Uncharacterized protein.
   
 0.974
H3D6H6_TETNG
Cell cycle checkpoint control protein; Belongs to the rad9 family.
   
 0.974
H3DQ41_TETNG
ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family.
   
 0.969
H3CJ79_TETNG
Replication factor C subunit 1.
   
 0.968
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.