STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3CZD4_TETNGProtein tyrosine phosphatase receptor type Z1b. (2103 aa)    
Predicted Functional Partners:
H3D1F5_TETNG
Pleiotrophin.
   
 0.940
H3D8B4_TETNG
Midkine b.
    
 0.864
H3DDB0_TETNG
Uncharacterized protein.
    
 0.627
H3D620_TETNG
Brevican.
   
 0.592
H3DJH6_TETNG
Uncharacterized protein.
   
 0.592
FAM107A
Family with sequence similarity 107 member A.
      
 0.584
H3C5H2_TETNG
Aggrecan a.
    
 0.582
H3CYG6_TETNG
Aggrecan b.
    
 0.582
H3DGP9_TETNG
Mitogen-activated protein kinase kinase kinase 4.
   
 
 0.566
H3D6N5_TETNG
Neurocan b.
   
 
 0.555
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.