STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3D0C5_TETNGCoiled-coil domain containing 59. (264 aa)    
Predicted Functional Partners:
H3D573_TETNG
LLP homolog, long-term synaptic facilitation factor.
   
    0.903
H3D5B6_TETNG
Coiled-coil domain containing 58.
   
    0.600
H3D7L4_TETNG
Density-regulated protein; Belongs to the DENR family.
   
    0.599
H3CN64_TETNG
Optineurin.
    
  0.513
H3CPZ2_TETNG
Brix domain containing 2.
   
    0.499
H3D288_TETNG
RWD domain containing 1.
   
    0.497
H3D282_TETNG
RNA binding motif protein 42.
      
 0.483
H3CDF4_TETNG
Prefoldin subunit 3; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit alpha family.
   
    0.471
H3DDM4_TETNG
Mitochondrial ribosomal protein L47.
   
    0.459
Q4RLT9_TETNG
Chromosome 10 SCAF15019, whole genome shotgun sequence.
   
    0.444
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.