STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSTR3bSomatostatin receptor 3b; Belongs to the G-protein coupled receptor 1 family. (374 aa)    
Predicted Functional Partners:
Q4RVM6_TETNG
Chromosome 9 SCAF14991, whole genome shotgun sequence.
     
 0.955
H3DMY8_TETNG
Bardet-Biedl syndrome 2 protein homolog.
     
 0.538
H3D688_TETNG
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.
     
 0.536
H3CW16_TETNG
Bardet-Biedl syndrome 4.
     
 0.497
H3CYE9_TETNG
Bardet-Biedl syndrome 1.
     
 0.497
H3CQ61_TETNG
Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family.
     
 0.493
H3CI58_TETNG
Bardet-Biedl syndrome 9.
     
 0.487
POMC
Proopiomelanocortin.
    
 0.445
H3D829_TETNG
Leucine zipper transcription factor-like 1.
     
 0.432
PNOCa
Prepronociceptin a.
    
 0.429
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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