STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3D165_TETNGCalcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b. (2195 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
   
 0.982
H3DIA2_TETNG
Calcium channel, voltage-dependent, beta 2a.
   
 0.737
H3D317_TETNG
Voltage-dependent calcium channel gamma-4 subunit; Regulates the activity of L-type calcium channels that contain CACNA1C as pore-forming subunit (By similarity). Regulates the trafficking and gating properties of AMPA-selective glutamate receptors (AMPARs), including GRIA1 and GRIA4. Promotes their targeting to the cell membrane and synapses and modulates their gating properties by slowing their rates of activation, deactivation and desensitization and by mediating their resensitization; Belongs to the PMP-22/EMP/MP20 family. CACNG subfamily.
   
 
 0.664
H3DAE0_TETNG
Calcium channel, voltage-dependent, beta 4b subunit.
   
 0.631
H3DE27_TETNG
Calcium channel, voltage-dependent, beta 4a subunit.
   
 0.631
H3DAD9_TETNG
Calcium channel, voltage-dependent, beta 1 subunit.
   
 0.615
H3C8K0_TETNG
GuKc domain-containing protein.
   
 0.607
H3CI68_TETNG
Uncharacterized protein.
   
 0.607
H3DCA9_TETNG
Calcium channel, voltage-dependent, beta 3b.
   
 0.607
Q4RH36_TETNG
Chromosome undetermined SCAF15069, whole genome shotgun sequence.
   
 0.607
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.