STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
myf6Myogenic factor 6; Involved in muscle differentiation (myogenic factor). Induces fibroblasts to differentiate into myoblasts. Probable sequence specific DNA-binding protein (By similarity). (239 aa)    
Predicted Functional Partners:
MYOZ1
Myozenin 1.
   
  
 0.716
H3C0B4_TETNG
Myosin, light chain 1, alkali; skeletal, fast.
   
  
 0.683
Q4S3B9_TETNG
Chromosome 1 SCAF14751, whole genome shotgun sequence.
    
 0.683
H3CP99_TETNG
Myogenin.
  
 
0.672
H3D316_TETNG
Voltage-dependent calcium channel gamma-1 subunit; Regulatory subunit of the voltage-gated calcium channel that gives rise to L-type calcium currents in skeletal muscle. Regulates channel inactivation kinetics.
   
  
 0.626
H3DR29_TETNG
Voltage-dependent calcium channel gamma-1 subunit; Regulatory subunit of the voltage-gated calcium channel that gives rise to L-type calcium currents in skeletal muscle. Regulates channel inactivation kinetics.
   
  
 0.626
H3D623_TETNG
Myocyte enhancer factor 2d.
    
 0.623
MEF2D
Myocyte enhancer factor 2D.
    
 0.623
H3CFM3_TETNG
Transcription factor 3b.
    
 0.593
H3CVA9_TETNG
Transcription factor 12.
    
 0.593
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.