Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
H3BZV0_TETNG | H3D222_TETNG | ENSTNIP00000001516 | ENSTNIP00000014560 | Uncharacterized protein. | NACHT domain-containing protein. | 0.614 |
H3CIJ3_TETNG | H3D222_TETNG | ENSTNIP00000008071 | ENSTNIP00000014560 | Regulatory factor X, 5. | NACHT domain-containing protein. | 0.814 |
H3CIJ3_TETNG | H3D6N7_TETNG | ENSTNIP00000008071 | ENSTNIP00000016177 | Regulatory factor X, 5. | Regulatory factor X-associated ankyrin-containing protein. | 0.964 |
H3D222_TETNG | H3BZV0_TETNG | ENSTNIP00000014560 | ENSTNIP00000001516 | NACHT domain-containing protein. | Uncharacterized protein. | 0.614 |
H3D222_TETNG | H3CIJ3_TETNG | ENSTNIP00000014560 | ENSTNIP00000008071 | NACHT domain-containing protein. | Regulatory factor X, 5. | 0.814 |
H3D222_TETNG | H3D6N7_TETNG | ENSTNIP00000014560 | ENSTNIP00000016177 | NACHT domain-containing protein. | Regulatory factor X-associated ankyrin-containing protein. | 0.710 |
H3D222_TETNG | H3DQ21_TETNG | ENSTNIP00000014560 | ENSTNIP00000022620 | NACHT domain-containing protein. | Uncharacterized protein. | 0.543 |
H3D222_TETNG | PAN2 | ENSTNIP00000014560 | ENSTNIP00000015506 | NACHT domain-containing protein. | PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent [...] | 0.494 |
H3D6N7_TETNG | H3CIJ3_TETNG | ENSTNIP00000016177 | ENSTNIP00000008071 | Regulatory factor X-associated ankyrin-containing protein. | Regulatory factor X, 5. | 0.964 |
H3D6N7_TETNG | H3D222_TETNG | ENSTNIP00000016177 | ENSTNIP00000014560 | Regulatory factor X-associated ankyrin-containing protein. | NACHT domain-containing protein. | 0.710 |
H3DQ21_TETNG | H3D222_TETNG | ENSTNIP00000022620 | ENSTNIP00000014560 | Uncharacterized protein. | NACHT domain-containing protein. | 0.543 |
H3DQ21_TETNG | PAN2 | ENSTNIP00000022620 | ENSTNIP00000015506 | Uncharacterized protein. | PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent [...] | 0.549 |
PAN2 | H3D222_TETNG | ENSTNIP00000015506 | ENSTNIP00000014560 | PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent [...] | NACHT domain-containing protein. | 0.494 |
PAN2 | H3DQ21_TETNG | ENSTNIP00000015506 | ENSTNIP00000022620 | PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent [...] | Uncharacterized protein. | 0.549 |