STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3D2Z9_TETNGThreonyl-tRNA synthetase-like 2. (800 aa)    
Predicted Functional Partners:
H3CV18_TETNG
Tyrosine--tRNA ligase.
  
 
 0.788
H3C838_TETNG
ProRS-C_1 domain-containing protein.
  
 
 0.767
H3C8H7_TETNG
Uncharacterized protein.
  
 
 0.767
H3D2X2_TETNG
Glutamyl-prolyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.767
H3CRE9_TETNG
Valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.745
RPL27A
Ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.
   
 
 0.709
H3CLU2_TETNG
Mitochondrial translational initiation factor 2.
  
 0.691
H3CQA5_TETNG
Mitochondrial ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.689
Q4RXN3_TETNG
Chromosome 11 SCAF14979, whole genome shotgun sequence; Belongs to the bacterial ribosomal protein bL20 family.
  
 
 0.685
H3DRA6_TETNG
Mitochondrial ribosomal protein L27.
  
 
 0.678
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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