STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3D321_TETNGParvalbumin 5; Belongs to the parvalbumin family. (108 aa)    
Predicted Functional Partners:
H3DAM6_TETNG
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.633
H3D5K7_TETNG
WD repeat domain 90.
   
 0.514
H3CX31_TETNG
Doublecortin-like kinase 1a.
   
 0.457
H3DFR7_TETNG
Doublecortin-like kinase 1b.
   
 0.457
H3D3A6_TETNG
Xeroderma pigmentosum, complementation group C.
    
 0.454
Q4SZQ5_TETNG
Peptidylprolyl isomerase.
   
 0.420
Q4SH08_TETNG
Peptidylprolyl isomerase.
   
 0.420
H3D074_TETNG
Peptidylprolyl isomerase.
   
 0.420
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.