STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q4S7L6_TETNGChromosome undetermined SCAF14714, whole genome shotgun sequence. (477 aa)    
Predicted Functional Partners:
H3BVK9_TETNG
Piwi domain-containing protein.
 
     0.848
Q4SXU1_TETNG
Chromosome undetermined SCAF12329, whole genome shotgun sequence.
 
     0.842
H3CIQ2_TETNG
Dicer 1, ribonuclease type III; Belongs to the helicase family. Dicer subfamily.
   
 0.807
H3BWH0_TETNG
Trinucleotide repeat containing adaptor 6C1.
    
 0.794
H3CTF3_TETNG
Drosha ribonuclease III.
   
 0.682
H3CEX5_TETNG
Trinucleotide repeat containing adaptor 6C2.
    
 0.656
H3DNI6_TETNG
Tudor domain containing 1.
    
 
 0.646
Q4T5B1_TETNG
Chromosome undetermined SCAF9337, whole genome shotgun sequence.
   
 0.643
H3D049_TETNG
Peptidylprolyl isomerase.
    
 
 0.629
H3CKN8_TETNG
Phospholipase D family, member 6.
      
 0.621
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.