STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3D456_TETNGRetinoid isomerohydrolase RPE65 b. (533 aa)    
Predicted Functional Partners:
Q4SRZ4_TETNG
Chromosome 18 SCAF14485, whole genome shotgun sequence.
     
 0.917
H3C7P4_TETNG
LRAT domain-containing protein.
     
 0.915
H3CNT7_TETNG
Lecithin retinol acyltransferase a.
     
 0.915
Q4T3T1_TETNG
Chromosome undetermined SCAF9929, whole genome shotgun sequence.
   
 
 0.909
Q4SMW0_TETNG
Chromosome 6 SCAF14544, whole genome shotgun sequence; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.907
H3DAG8_TETNG
PNPLA domain-containing protein.
     
 0.907
H3DB77_TETNG
Retinol dehydrogenase 20; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.907
Q4THX0_TETNG
Chromosome undetermined SCAF2607, whole genome shotgun sequence.
     
 0.904
H3CSW9_TETNG
Retinoid isomerohydrolase RPE65 a.
  
  
 
0.901
H3DQU0_TETNG
Retinol dehydrogenase 5 (11-cis/9-cis); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
  
 0.564
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.