STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3D4Y6_TETNGCollagen, type IX, alpha 3. (679 aa)    
Predicted Functional Partners:
H3CTI5_TETNG
Integrin beta; Belongs to the integrin beta chain family.
    
 0.911
SDC4
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
     
  0.900
H3C0I8_TETNG
Integrin beta; Belongs to the integrin beta chain family.
    
 0.692
H3CN97_TETNG
Integrin beta; Belongs to the integrin beta chain family.
    
 0.692
H3CVR4_TETNG
Integrin beta; Belongs to the integrin beta chain family.
    
 0.689
H3D5P1_TETNG
Integrin, alpha 3b; Belongs to the integrin alpha chain family.
     
 0.689
H3DE56_TETNG
Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.
     
 0.682
H3DHR6_TETNG
Integrin, alpha 6a; Belongs to the integrin alpha chain family.
     
 0.682
H3DQA3_TETNG
VWFA domain-containing protein.
     
 0.679
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.