STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q4S544_TETNGChromosome 6 SCAF14737, whole genome shotgun sequence. (102 aa)    
Predicted Functional Partners:
H3BZT2_TETNG
Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
    
 0.679
cyc
Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain (By similarity).
    
 0.679
H3CNL6_TETNG
Aurora kinase A; Belongs to the protein kinase superfamily.
   
 0.642
H3DE62_TETNG
Aurora kinase B; Belongs to the protein kinase superfamily.
   
 0.642
H3C1Q5_TETNG
Apoptosis, caspase activation inhibitor.
    
 0.609
H3DJZ9_TETNG
Cathepsin Ba; Belongs to the peptidase C1 family.
   
 0.526
H3C9I5_TETNG
Ran GTPase activating protein 1b.
   
 
 0.504
H3CHN7_TETNG
RAN GTPase activating protein 1a.
   
 
 0.504
H3CIY3_TETNG
Baculoviral IAP repeat containing 6.
   
 0.494
H3CIY4_TETNG
Baculoviral IAP repeat containing 6.
   
 0.494
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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