STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3D625_TETNGCalpain 7; Belongs to the peptidase C2 family. (828 aa)    
Predicted Functional Partners:
CAPNS1
Calpain small subunit 1.
   
 0.816
H3CAQ4_TETNG
Uncharacterized protein.
    
 0.634
MMP23B
Matrix metallopeptidase 23B.
      
 0.575
H3CUZ0_TETNG
Oxidoreductase NAD-binding domain containing 1.
   
  
 0.556
H3CY36_TETNG
Transmembrane protein 132E.
      
 0.540
H3DFV8_TETNG
Intersectin 2a.
   
 
  0.535
H3DK01_TETNG
Uncharacterized protein.
   
 
  0.535
H3CFP5_TETNG
Uncharacterized protein.
   
  
 0.458
H3CV03_TETNG
Penta-EF-hand domain containing 1.
   
 0.425
H3C502_TETNG
Uncharacterized protein.
   
 0.417
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.