Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
H3CFG3_TETNG | H3CH30_TETNG | ENSTNIP00000006987 | ENSTNIP00000007558 | Elongation factor RNA polymerase II. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.662 |
H3CFG3_TETNG | H3CQ12_TETNG | ENSTNIP00000006987 | ENSTNIP00000010346 | Elongation factor RNA polymerase II. | Uncharacterized protein. | 0.735 |
H3CFG3_TETNG | H3CY01_TETNG | ENSTNIP00000006987 | ENSTNIP00000013136 | Elongation factor RNA polymerase II. | Uncharacterized protein. | 0.401 |
H3CFG3_TETNG | H3CZ95_TETNG | ENSTNIP00000006987 | ENSTNIP00000013580 | Elongation factor RNA polymerase II. | Elongation factor, RNA polymerase II, 2. | 0.426 |
H3CFG3_TETNG | H3DE37_TETNG | ENSTNIP00000006987 | ENSTNIP00000018780 | Elongation factor RNA polymerase II. | ELL associated factor 2. | 0.850 |
H3CFG3_TETNG | H3DLG9_TETNG | ENSTNIP00000006987 | ENSTNIP00000021367 | Elongation factor RNA polymerase II. | AF4/FMR2 family, member 4. | 0.867 |
H3CFG3_TETNG | Q4S464_TETNG | ENSTNIP00000006987 | ENSTNIP00000015968 | Elongation factor RNA polymerase II. | Chromosome undetermined SCAF14743, whole genome shotgun sequence. | 0.901 |
H3CFG3_TETNG | Q4S925_TETNG | ENSTNIP00000006987 | ENSTNIP00000014688 | Elongation factor RNA polymerase II. | Chromosome undetermined SCAF14702, whole genome shotgun sequence; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.623 |
H3CH30_TETNG | H3CFG3_TETNG | ENSTNIP00000007558 | ENSTNIP00000006987 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Elongation factor RNA polymerase II. | 0.662 |
H3CH30_TETNG | H3CQ12_TETNG | ENSTNIP00000007558 | ENSTNIP00000010346 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Uncharacterized protein. | 0.622 |
H3CH30_TETNG | H3CY01_TETNG | ENSTNIP00000007558 | ENSTNIP00000013136 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Uncharacterized protein. | 0.662 |
H3CH30_TETNG | H3CZ95_TETNG | ENSTNIP00000007558 | ENSTNIP00000013580 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Elongation factor, RNA polymerase II, 2. | 0.662 |
H3CH30_TETNG | H3DE37_TETNG | ENSTNIP00000007558 | ENSTNIP00000018780 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | ELL associated factor 2. | 0.802 |
H3CH30_TETNG | H3DLG9_TETNG | ENSTNIP00000007558 | ENSTNIP00000021367 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | AF4/FMR2 family, member 4. | 0.647 |
H3CH30_TETNG | H3DPI8_TETNG | ENSTNIP00000007558 | ENSTNIP00000022437 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Si:ch211-13k12.2. | 0.662 |
H3CH30_TETNG | IWS1 | ENSTNIP00000007558 | ENSTNIP00000014158 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Interacts with SUPT6H, CTD assembly factor 1. | 0.918 |
H3CH30_TETNG | Q4S464_TETNG | ENSTNIP00000007558 | ENSTNIP00000015968 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Chromosome undetermined SCAF14743, whole genome shotgun sequence. | 0.939 |
H3CH30_TETNG | Q4S925_TETNG | ENSTNIP00000007558 | ENSTNIP00000014688 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Chromosome undetermined SCAF14702, whole genome shotgun sequence; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.998 |
H3CQ12_TETNG | H3CFG3_TETNG | ENSTNIP00000010346 | ENSTNIP00000006987 | Uncharacterized protein. | Elongation factor RNA polymerase II. | 0.735 |
H3CQ12_TETNG | H3CH30_TETNG | ENSTNIP00000010346 | ENSTNIP00000007558 | Uncharacterized protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.622 |
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