STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q4S464_TETNGChromosome undetermined SCAF14743, whole genome shotgun sequence. (255 aa)    
Predicted Functional Partners:
H3DE37_TETNG
ELL associated factor 2.
  
 
0.967
H3CZ95_TETNG
Elongation factor, RNA polymerase II, 2.
    
 0.962
H3DLG9_TETNG
AF4/FMR2 family, member 4.
    
 0.962
Q4S925_TETNG
Chromosome undetermined SCAF14702, whole genome shotgun sequence; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
 0.941
H3CH30_TETNG
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.939
H3CQ12_TETNG
Uncharacterized protein.
    
 0.902
H3CFG3_TETNG
Elongation factor RNA polymerase II.
    
 0.901
H3CY01_TETNG
Uncharacterized protein.
    
 0.894
H3DPI8_TETNG
Si:ch211-13k12.2.
    
 0.894
IWS1
Interacts with SUPT6H, CTD assembly factor 1.
   
 
  0.885
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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