STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3D6J3_TETNGDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1391 aa)    
Predicted Functional Partners:
Q4RCT8_TETNG
Chromosome undetermined SCAF18092, whole genome shotgun sequence.
  
 0.999
H3CLB3_TETNG
Polymerase (RNA) III (DNA directed) polypeptide D.
   
 0.998
Q4SCJ6_TETNG
Chromosome undetermined SCAF14653, whole genome shotgun sequence.
  
 0.998
Q4S7A1_TETNG
Chromosome 1 SCAF14716, whole genome shotgun sequence.
   
 0.998
POLR2E
Chromosome 1 SCAF14751, whole genome shotgun sequence.
  
 0.998
H3DFD4_TETNG
Calcitonin gene-related peptide-receptor component protein.
   
 0.998
Q4RHC2_TETNG
Chromosome 3 SCAF15050, whole genome shotgun sequence; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
   
 0.998
H3DQC2_TETNG
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.998
H3CEM7_TETNG
Polymerase (RNA) III (DNA directed) polypeptide E.
   
 0.997
H3C732_TETNG
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
 0.995
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.