STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3D719_TETNGUncharacterized protein. (983 aa)    
Predicted Functional Partners:
H3CY96_TETNG
Uncharacterized protein.
      
 0.624
H3CQW0_TETNG
Uncharacterized protein.
      
 0.580
H3DH17_TETNG
Calponin-homology (CH) domain-containing protein.
   
  
 0.574
CFAP61
Cilia and flagella associated protein 61.
   
  
 0.566
H3DEG1_TETNG
WD repeat domain 66.
      
 0.557
H3D8U5_TETNG
MYCBP-associated, testis expressed 1.
   
  
 0.529
H3CL53_TETNG
Protein kinase domain-containing protein.
      
 0.514
H3DQH8_TETNG
Tektin 2 (testicular).
   
  
 0.511
H3D407_TETNG
Armadillo repeat containing 2.
      
 0.489
Q4RX47_TETNG
Chromosome 11 SCAF14979, whole genome shotgun sequence.
      
 0.483
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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