STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3D8S7_TETNGGA binding protein transcription factor subunit alpha. (440 aa)    
Predicted Functional Partners:
H3CGU2_TETNG
GA binding protein transcription factor subunit beta 2a.
    
 0.994
H3DAL9_TETNG
ATP synthase-coupling factor 6, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain; Belongs to the eukaryotic ATPase subunit F6 family.
      
 0.617
H3CAB5_TETNG
Upstream transcription factor 2, c-fos interacting.
   
  
 0.603
H3DGH5_TETNG
Suppressor of fused homolog.
   
 
 0.600
H3CLY8_TETNG
Methyltransferase like 23.
      
 0.560
H3C100_TETNG
Uncharacterized protein.
      
 0.547
H3CQ66_TETNG
Nuclear respiratory factor 1.
     
 0.486
H3BY70_TETNG
HMG box domain-containing protein.
   
 
 0.466
H3CDR3_TETNG
Transcription factor A, mitochondrial.
   
 
 0.466
H3C8P2_TETNG
RRM domain-containing protein.
   
 
 0.446
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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