STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3D8U5_TETNGMYCBP-associated, testis expressed 1. (761 aa)    
Predicted Functional Partners:
CFAP61
Cilia and flagella associated protein 61.
  
 
 0.574
H3CW24_TETNG
Uncharacterized protein.
  
 0.539
Q4TIQ5_TETNG
Chromosome undetermined SCAF1869, whole genome shotgun sequence; Belongs to the DEAD box helicase family.
    
 0.533
H3CP59_TETNG
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
    
 
 0.532
H3D719_TETNG
Uncharacterized protein.
   
  
 0.529
H3DEG1_TETNG
WD repeat domain 66.
      
 0.508
H3D8U6_TETNG
Nuclear receptor subfamily 1, group I, member 2.
    
 0.498
H3DFG2_TETNG
OVCA2 serine hydrolase domain containing.
      
 0.497
H3DH17_TETNG
Calponin-homology (CH) domain-containing protein.
   
 0.492
Q4SY73_TETNG
Chromosome 21 SCAF12158, whole genome shotgun sequence.
    
 
 0.485
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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