STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3DAF6_TETNGCyclic nucleotide-binding domain-containing protein. (430 aa)    
Predicted Functional Partners:
H3CTM7_TETNG
Cyclic nucleotide gated channel beta 3, tandem duplicate 2.
  
0.624
H3CTM6_TETNG
Cyclic nucleotide gated channel beta 3, tandem duplicate 1.
  
0.623
H3CTT3_TETNG
Si:dkey-44k1.5.
  
0.623
H3CF89_TETNG
Cyclic nucleotide gated channel beta 1a.
  
0.619
H3CTT5_TETNG
Uncharacterized protein.
 
 
 0.561
Q4S5Q9_TETNG
Chromosome 9 SCAF14729, whole genome shotgun sequence.
   
 
 0.480
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.