close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fundc1FUN14 domain-containing protein 1; Acts as an activator of hypoxia-induced mitophagy, an important mechanism for mitochondrial quality control; Belongs to the FUN14 family. (158 aa)    
Predicted Functional Partners:
Q4RPI5_TETNG
PGAM family member 5, serine/threonine protein phosphatase, mitochondrial.
     
 0.995
H3CAY0_TETNG
Microtubule-associated protein 1 light chain 3 alpha.
    
 0.979
H3CTW4_TETNG
GABA(A) receptor-associated protein like 2.
   
 0.972
H3CS96_TETNG
Zgc:92606.
    
 0.965
H3DM77_TETNG
Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.
     
 0.958
Q4T6M3_TETNG
Chromosome undetermined SCAF8700, whole genome shotgun sequence.
   
 
 0.948
H3DM83_TETNG
Zgc:86598; Belongs to the protein kinase superfamily.
   
 
 0.948
H3DLN8_TETNG
Tyrosine-protein kinase.
    
 0.947
H3DQF3_TETNG
Tyrosine-protein kinase.
    
 0.947
H3CRQ2_TETNG
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.
     
 0.843
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.