STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q4RXT5_TETNGER membrane protein complex subunit 3; Belongs to the EMC3 family. (261 aa)    
Predicted Functional Partners:
H3CDG2_TETNG
ER membrane protein complex subunit 4; Belongs to the EMC4 family.
   
 
 0.958
H3C489_TETNG
ER membrane protein complex subunit 6.
   
 
 0.954
H3DDC1_TETNG
ER membrane protein complex subunit 2.
   
 
 0.952
H3D3U0_TETNG
ER membrane protein complex subunit 7.
   
 
 0.946
H3D367_TETNG
ER membrane protein complex subunit 1.
    
 
 0.937
H3CKB0_TETNG
Membrane magnesium transporter 1.
   
 
 0.936
H3CV63_TETNG
ER membrane protein complex subunit 8.
    
 
 0.934
H3CKX6_TETNG
ER membrane protein complex subunit 10.
    
 
 0.931
H3C3W5_TETNG
Dynactin 4.
    
 
 0.881
H3CBF6_TETNG
Ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.818
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.