STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3DC35_TETNGZgc:194242. (127 aa)    
Predicted Functional Partners:
H3DG23_TETNG
Farnesyl-diphosphate farnesyltransferase 1.
   
 0.728
H3CC33_TETNG
Sterol-C5-desaturase; Belongs to the sterol desaturase family.
   
 
 0.676
Q4T6G9_TETNG
Chromosome undetermined SCAF8763, whole genome shotgun sequence.
  
  
 0.676
H3DE43_TETNG
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
   
 
 0.626
H3D6L5_TETNG
Hydroxysteroid (17-beta) dehydrogenase 7.
    
 
 0.614
ERG28
Chromosome 10 SCAF15019, whole genome shotgun sequence.
    
 
 0.613
Q4T3B4_TETNG
Chromosome undetermined SCAF10102, whole genome shotgun sequence.
   
 0.612
H3D075_TETNG
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.610
H3CGI4_TETNG
Sigma non-opioid intracellular receptor 1.
   
 0.569
H3CGI7_TETNG
Uncharacterized protein.
   
 0.569
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.