Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
H3BVJ6_TETNG | H3DCE7_TETNG | ENSTNIP00000000008 | ENSTNIP00000018190 | SH3 domain-binding glutamic acid-rich-like protein; Belongs to the SH3BGR family. | Neugrin, neurite outgrowth associated. | 0.406 |
H3CS67_TETNG | H3D1B1_TETNG | ENSTNIP00000011101 | ENSTNIP00000014297 | Pentatricopeptide repeat domain 1. | DEAD (Asp-Glu-Ala-Asp) box polypeptide 28. | 0.436 |
H3CS67_TETNG | H3DAK9_TETNG | ENSTNIP00000011101 | ENSTNIP00000017550 | Pentatricopeptide repeat domain 1. | FAST kinase domains 2. | 0.503 |
H3CS67_TETNG | H3DB63_TETNG | ENSTNIP00000011101 | ENSTNIP00000017755 | Pentatricopeptide repeat domain 1. | TruB pseudouridine (psi) synthase family member 2. | 0.408 |
H3CS67_TETNG | H3DCE7_TETNG | ENSTNIP00000011101 | ENSTNIP00000018190 | Pentatricopeptide repeat domain 1. | Neugrin, neurite outgrowth associated. | 0.570 |
H3CS67_TETNG | H3DFL9_TETNG | ENSTNIP00000011101 | ENSTNIP00000019313 | Pentatricopeptide repeat domain 1. | SpoU_sub_bind domain-containing protein. | 0.503 |
H3CS67_TETNG | Q4RXL3_TETNG | ENSTNIP00000011101 | ENSTNIP00000017704 | Pentatricopeptide repeat domain 1. | Chromosome 11 SCAF14979, whole genome shotgun sequence. | 0.492 |
H3CY41_TETNG | H3DAK9_TETNG | ENSTNIP00000013176 | ENSTNIP00000017550 | RCC1 like. | FAST kinase domains 2. | 0.408 |
H3CY41_TETNG | H3DB63_TETNG | ENSTNIP00000013176 | ENSTNIP00000017755 | RCC1 like. | TruB pseudouridine (psi) synthase family member 2. | 0.535 |
H3CY41_TETNG | H3DCE7_TETNG | ENSTNIP00000013176 | ENSTNIP00000018190 | RCC1 like. | Neugrin, neurite outgrowth associated. | 0.510 |
H3CY41_TETNG | Q4RXL3_TETNG | ENSTNIP00000013176 | ENSTNIP00000017704 | RCC1 like. | Chromosome 11 SCAF14979, whole genome shotgun sequence. | 0.415 |
H3D1B1_TETNG | H3CS67_TETNG | ENSTNIP00000014297 | ENSTNIP00000011101 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 28. | Pentatricopeptide repeat domain 1. | 0.436 |
H3D1B1_TETNG | H3DAK9_TETNG | ENSTNIP00000014297 | ENSTNIP00000017550 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 28. | FAST kinase domains 2. | 0.744 |
H3D1B1_TETNG | H3DB63_TETNG | ENSTNIP00000014297 | ENSTNIP00000017755 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 28. | TruB pseudouridine (psi) synthase family member 2. | 0.596 |
H3D1B1_TETNG | H3DCE7_TETNG | ENSTNIP00000014297 | ENSTNIP00000018190 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 28. | Neugrin, neurite outgrowth associated. | 0.515 |
H3D1B1_TETNG | H3DFL9_TETNG | ENSTNIP00000014297 | ENSTNIP00000019313 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 28. | SpoU_sub_bind domain-containing protein. | 0.941 |
H3D1B1_TETNG | H3DLX1_TETNG | ENSTNIP00000014297 | ENSTNIP00000021519 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 28. | GTP-binding protein 10 (putative). | 0.816 |
H3D1B1_TETNG | Q4RXL3_TETNG | ENSTNIP00000014297 | ENSTNIP00000017704 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 28. | Chromosome 11 SCAF14979, whole genome shotgun sequence. | 0.568 |
H3D395_TETNG | H3DCE7_TETNG | ENSTNIP00000014983 | ENSTNIP00000018190 | Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. | Neugrin, neurite outgrowth associated. | 0.613 |
H3DAK9_TETNG | H3CS67_TETNG | ENSTNIP00000017550 | ENSTNIP00000011101 | FAST kinase domains 2. | Pentatricopeptide repeat domain 1. | 0.503 |
page 1 of 4