STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3DCK5_TETNGInterferon regulatory factor 3. (377 aa)    
Predicted Functional Partners:
H3CNJ7_TETNG
CREB binding protein b.
    
 0.968
H3D9B5_TETNG
CREB binding protein a.
    
 0.968
H3CCH3_TETNG
TANK-binding kinase 1.
   
 0.967
H3CL95_TETNG
E1A binding protein p300 b.
    
 0.924
H3D5Y4_TETNG
E1A binding protein p300 a.
    
 0.924
H3D1E0_TETNG
Interferon regulatory factor 7.
     
0.888
H3CA66_TETNG
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.887
H3CPA7_TETNG
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
   
 0.882
H3D5D2_TETNG
Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.
   
 0.791
H3C5J3_TETNG
TRAF family member-associated NFKB activator.
    
 0.772
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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