STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3DDW3_TETNGUncharacterized protein. (735 aa)    
Predicted Functional Partners:
H3CVR9_TETNG
5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase.
    
 0.622
NT5E
5'-nucleotidase ecto; Belongs to the 5'-nucleotidase family.
    
 0.610
Q4TFV1_TETNG
Chromosome undetermined SCAF4185, whole genome shotgun sequence.
  
 
 0.558
H3CCF3_TETNG
Guanine monophosphate synthase.
  
 
 0.558
H3C3H6_TETNG
YbeY metalloendoribonuclease.
  
  
 0.511
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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