STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3DE62_TETNGAurora kinase B; Belongs to the protein kinase superfamily. (278 aa)    
Predicted Functional Partners:
H3DF80_TETNG
Uncharacterized protein.
   
 0.991
H3C6F5_TETNG
Cell division cycle associated 8.
   
 0.980
Q4T775_TETNG
Chromosome undetermined SCAF8259, whole genome shotgun sequence.
   
 0.953
H3BVY4_TETNG
NDC80 kinetochore complex component.
   
 
 0.949
H3D5Q7_TETNG
Baculoviral IAP repeat containing 5a.
   
 0.945
H3C207_TETNG
Kinesin family member 11; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.935
H3DC90_TETNG
Baculoviral IAP repeat containing 5b.
   
 0.931
H3CIY3_TETNG
Baculoviral IAP repeat containing 6.
   
 0.928
H3CIY4_TETNG
Baculoviral IAP repeat containing 6.
   
 0.928
H3CBE0_TETNG
Ubiquitin-conjugating enzyme E2C; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.923
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.