STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3DEB8_TETNGAnkyrin repeat and SOCS box-containing 12b. (321 aa)    
Predicted Functional Partners:
H3CG70_TETNG
COMM domain containing 8.
   
  0.624
H3CGU0_TETNG
Ankyrin repeat and SOCS box containing 2a, tandem duplicate 1.
  
 
0.617
H3CDI7_TETNG
Cullin 5a; Belongs to the cullin family.
    
 0.616
H3CSV1_TETNG
Ankyrin repeat and SOCS box containing 10.
  
 
 0.613
H3CFX5_TETNG
Copper metabolism (Murr1) domain containing 1.
    
  0.611
H3CSL5_TETNG
COMM domain containing 4.
    
 0.605
H3CKE3_TETNG
Ring finger protein 7.
    
 0.596
H3CAG5_TETNG
COMM domain containing 9.
    
  0.594
H3CNW0_TETNG
COMM domain containing 2.
    
  0.594
H3CMY3_TETNG
COMM domain containing 7.
    
  0.573
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.