STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3DFS4_TETNGFH2 domain containing 4. (572 aa)    
Predicted Functional Partners:
H3DLL3_TETNG
Sulfite oxidase.
      
 0.609
H3DLD4_TETNG
Anillin, actin binding protein.
   
 0.545
RHOB
Ras homolog family member B.
    
 0.501
Q4SWJ4_TETNG
Chromosome 9 SCAF13615, whole genome shotgun sequence.
    
 0.501
H3CYD2_TETNG
Rho family GTPase 3a.
    
 0.501
Q4RXL7_TETNG
Chromosome 11 SCAF14979, whole genome shotgun sequence.
    
 0.501
Q4RW89_TETNG
Chromosome 9 SCAF14991, whole genome shotgun sequence.
    
 0.501
Q4RW56_TETNG
Chromosome 9 SCAF14991, whole genome shotgun sequence.
    
 0.501
H3DCB0_TETNG
Rho family GTPase 1b.
    
 0.501
H3DLP6_TETNG
Ras homolog family member Ca.
    
 0.501
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.