STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q4RRE0_TETNGChromosome 16 SCAF15002, whole genome shotgun sequence. (265 aa)    
Predicted Functional Partners:
H3CHW8_TETNG
Proteasome 26S subunit, non-ATPase 12.
   
 0.999
H3DJY6_TETNG
Proteasome 26S subunit, ATPase 3.
   
 0.999
H3CIJ2_TETNG
Proteasome subunit beta; Belongs to the peptidase T1B family.
   
 0.998
H3CVR6_TETNG
Proteasome 26S subunit, non-ATPase 14.
   
 0.998
PSMA4
Proteasome subunit alpha type.
   
 0.998
Q4SGW6_TETNG
Chromosome 14 SCAF14590, whole genome shotgun sequence; Belongs to the AAA ATPase family.
   
 0.998
Q4SBC3_TETNG
Chromosome 11 SCAF14674, whole genome shotgun sequence.
   
 0.998
H3D3I6_TETNG
Proteasome 26S subunit, non-ATPase 7.
   
 0.998
H3D9G3_TETNG
Proteasome subunit beta.
   
 0.998
H3DCN4_TETNG
Proteasome subunit alpha type.
   
 0.998
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.